Plague & Yersinia Pestis
Florent SEBBANE
INSERM Research Director
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Plague is a highly lethal disease caused by the Gram-negative bacterium Yersinia pestis, which emerged relatively recently in human history. Known for the millions of deaths it has caused, plague has profoundly shaped societies at political, economic, and cultural levels. Today, it remains a major international public health concern, heightened by the emergence of antibiotic-resistant strains and the risk of deliberate misuse as a biological weapon.
Our research program is built around a central objective: understanding how plague emerged, why it persists, and how its spread can be prevented. We investigate how a benign enteric bacterium evolved into a highly virulent, flea-borne pathogen, and how ongoing microevolution continues to shape epidemic dynamics and disease severity. We integrate molecular, environmental, and societal factors to explain how plague is maintained and how it spreads across time and space. Ultimately, this integrated approach enables the development of innovative strategies to limit transmission and provides a conceptual framework to anticipate the emergence of future infectious threats, including so-called Disease X.
Our research is carried out through a set of nationally and internationally funded projects that address plague from complementary evolutionary, ecological, biological, and societal perspectives. Together, these projects aim to understand how plague emerges, persists, and spreads, and how this knowledge can be translated into strategies to prevent future outbreaks.
ERC Synergy-Plague (2024-2030)
Reconstructing the environmental, biological, and societal drivers of plague outbreaks in Eurasia (1300–1900 CE).
Co-PIs: F. Sebbane (Inserm), N. C. Stenseth (University of Oslo), P. Slavin (University of Stirling), U. Büntgen (University of Cambridge)
This large interdisciplinary project investigates the resurgence of plague in Central Asia during the 14th century and its subsequent spread across Eurasia. By combining historical sources, environmental reconstructions, ancient DNA, and mathematical modeling, the project seeks to unravel why plague repeatedly emerged, spread, and disappeared over time, and to identify the drivers underlying these complex dynamics.
https://www.synergy-plague.org
PEPR-MIE – DEBS-Plague (2024-2028)
Environmental, biological, and societal determinants of plague re-emergence in France
PI: F. Sebbane
This project aims to identify the ecological and biological conditions that could favor or limit the re-establishment of plague on French territory. Using an interdisciplinary approach, it seeks to anticipate and prevent plague re-emergence, while developing a conceptual and operational framework applicable to other zoonotic diseases.
ANR ADAPT (2023-2027)
The adaptive nature of plague transmission by fleas
PI: F. Sebbane
ADAPT explores how flea biology and the microevolution of Yersinia pestis shape plague transmission, persistence, and extinction. By combining experimental biology, omics approaches, and epidemiological modeling, the project addresses why plague can re-emerge after long periods of silence or disappear entirely from certain regions.
MSCA FACTORS (2025-2027)
Biological determinants of flea physiology and pathogen transmission
PI: A. Rolandelli
This project focuses on the largely neglected biology of fleas, key vectors of plague and other diseases. It aims to identify the physiological factors that influence their ability to transmit pathogens, providing essential knowledge to better understand flea-borne disease dynamics and to develop sustainable control strategies.
CPER RESISTOMIC (2025–2028)
Biological determinants of flea physiology and pathogen transmission
PI: A. Rolandelli
RESISTOMIC complements MSCA FACTORS by strengthening regional research capacity on flea biology and vector competence. It supports the development of experimental and analytical approaches aimed at deciphering how flea physiology shapes pathogen transmission.
ANR RESISTANT (2022-2026)
Bacterial signaling and adaptation of Yersinia pestis to its vector
PI: S. Bontemps-Gallo
This project investigates how Yersinia pestis senses and adapts to the flea gut environment through bacterial signaling pathways. By characterizing vector-associated stresses and bacterial responses, it aims to identify novel molecular targets for innovative anti-plague strategies.
MITI-CNRS MappingNetwork (2025-2026)
Mapping regulatory network dynamics in Yersinia pestis
PI: S. Bontemps-Gallo
This exploratory project develops an innovative mass-spectrometry-based approach to capture bacterial signaling network dynamics during infection. Applied to Y. pestis, it provides a systems-level view of how environmental cues are integrated during host and vector colonization.
- MSCA: Biological Factors in Fleas: Determinants of Physiology and Pathogen Transmission - FACTORS (2025 - 27) - PI: A. Rolandelli
- CPER-RESISTOMIC: Biological Determinants of Physiology and Pathogen Transmission in Fleas (2025 - 28) - PI : A. Rolandelli
- MITI-CNRS: Mapping the dynamics of regulatory networks of two-component systems in the plant pathogen Dickeya dadantii and the plague bacillus Yersinia pestis - MappingNetwork (2025 - 26) PU: S. Bontemps-Gallo
- ERC Synergy Reconstructing the environmental, biological, and societal drivers of plague outbreaks in Eurasia between 1300 and 1900 CE Co-PI: F. Sebbane w/ NC Stenseth (U. Oslo); P Slavin (U. Stirling); U. Buentgen (U. Cambridge)
- PEPR-MIE (ANRS/France2030) DEBS-Plague - PI: F. Sebbane
- ANR The adaptative nature of plague transmission by fleas - ADAPT (2023 - 27) - PI: F. Sebbane
- ANR Role of a cell signalling system in the adaptation of Yersinia pestis to its vector - RESISTANT (2022 - 26) - PI : S. Bontemps-Gallo
- Institut Pasteur Paris – ACIP (2021-22) co-PI: F. Sebbane
- I-Site Young Researcher APPETISER (2020 - 22) - PI : S. Bontemps-Gallo
- ANR Lighting up fleas to understand the complex transmission mechanisms of Yersinia pestis - Lucy (2016 - 22) - PI: F. Sebbane
Current Staff
BAETZ Benjamin
Postdoctoral Fellow - IPL
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BAILLEZ Alexandre
PhD student - University of Lille
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BANTZ Alexandre
Postdoctoral Fellow-INSERM
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BIDON Aurore
INSERM Assistant Engineer
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BONTEMPS-GALLO Sébastien
CNRS research associate
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DÉGARDIN Maurane
PhD student- University of Lille
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DEWITTE Amélie
Engineer-Inserm
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DUPONT Camille
INSERM Technician
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FOURRÉ Mattéo
Master 2 student - University of Lille
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GOERLINGER Alexandre
Postdoctoral Fellow - IPL
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HAGNERÉ Camille
Engineer-IPL
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LOSHOUARN Henri
Postdoctoral Fellow - IPL
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MARCEAU Michael
Assistant Professor University of Lille
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NDIAYE El Hadji Ibrahim
Postdoctoral Fellow-INSERM
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ONGOUDOU-EKOUME Michel
INSERM Research Engineer
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PIERRE François
Research Engineer-University of Lille
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ROLANDELLI Agustin
INSERM Research Associate
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SEBBANE Florent
INSERM research director
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ALBICORO Francisco
Postdoctoral Fellow 2025 - 2025
BIBI-TRIKI Sabrina
PhD student 2011 - 2014
BOUVENOT Typhanie
PhD student 2017 - 2022
CHOUIKHA Iman
Postdoctoral Fellow 2017 - 2020
FERNANDEZ Marion
PhD student 2016 - 2019
LAFFITTE Alix
PhD student 2019 - 2022
LE GUILLOUZER
Servane Postdoctoral Fellow 2019 - 2022
LEMAITRE Nadine
PU-PH 2010 - 2025
PRADEL Elisabeth
Research Associate Inserm 2010 - 2018
QUINTARD Kévin
PhD student 2012 - 2015
REBOUL Angéline
PhD student 2010 - 2014
ROBIN Brandon
Postdoctoral Fellow 2022 - 2025
TITECAT Marie
PhD student 2013 - 2015
Keywords: plague, vector-borne transmission, bacterial evolution, flea biology, antimicrobial resistance
- Pierre, F., Baillez, A., Dewitte, A., Rolandelli, A., & Sebbane, F. Proteins of the SubB family provide multiple mechanisms of serum resistance in Yersinia pestis. Emerging Microbes & Infections. (2025)
- Lemaitre, N., Dewitte, A., Rakotomanimana, F., Gooden, D., Toone, E., Rajerison, M., Zhou, P., & Sebbane, F. Assessing the threat of Yersinia pestis harboring a multi-resistant IncC plasmid and the efficacy of an antibiotic targeting LpxC. Antimicrobial Agents and Chemotherapy. (2025)
- Robin, B., Dewitte, A., Alaimo, V., Lecoeur, C., Pierre, F., Billon, G., Sebbane, F., & Bontemps-Gallo, S. The CpxAR signaling system confers a fitness advantage for flea gut colonization by the plague bacillus. Journal of Bacteriology. (2024)
- Dewitte A, Werkmeister E, Pierre F, Sebbane F, Bontemps-Gallo S. A Widefield Light Microscopy-Based Approach Provides Further Insights into the Colonization of the Flea Proventriculus by Yersinia pestis. Applied and Environmental Microbiology. (2023)
- Slavin P, Sebbane F. Emergence and spread of ancestral Yersinia pestis in Late-Neolithic and Bronze-Age Eurasia, ca. 5,000 to 1,500 y B.P. Proceedings of the National Academy of Sciences. (2022)
- Bouvenot, T., Dewitte, A., Bennaceur, N., Pradel, E., Pierre, F., Bontemps-Gallo, S., & Sebbane, F. Interplay between Yersinia pestis and its flea vector in lipoate metabolism. The ISME Journal. (2021)
- Dewitte, A., Bouvenot, T., Pierre, F., Ricard, I., Pradel, E., Barois, N., Hujeux, A., Bontemps-Gallo, S., & Sebbane, F. (2020). A refined model of how Yersinia pestis produces a transmissible infection in its flea vector. PLoS Pathogens. (2020)